MGEx-Tdb - Mammalian Gene Expression Testis database | Tool name | MGEx-Tdb - Mammalian Gene Expression Testis database |
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| URL | http://resource.ibab.ac.in/MGEx-Tdb/ |
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| Important features | A manually curated testis specific database created by a novel meta-analysis approach. It can be queried with various pathological (e.g., testis cancer, azoospermia) and physiological conditions and also different cell types (e.g., spermatocyte, spermatid) and developmental stages (e.g., embryonic, adult). Each genes' expression status is indicated by a reliability score, derieved based on the consensus across multiple samples and studies. The database also provides basic information on each gene. |
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| Citations | Acharya KK, Chandrashekar DS, Chitturi N, Shah H, Malhotra V, Sreelakshmi KS, Deepti H, Bajpai A, Davuluri S, Bora P, Rao L. A novel tissue-specific meta-analysis approach for gene expression predictions, initiated with a mammalian gene expression testis database. BMC Genomics. 2010 Aug 11;11:467. PubMed PMID: 20699007; PubMed Central PMCID: PMC3091663. |
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| Year of publication | 2010 |
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| Rank by usage frequency | 100 |
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| Comments | |
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| Function | Microarray, Proteomic, Other technique(s), Multiple techniques, Human, Mouse, Rat, Multiple species |
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| Category | Online, Free |
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| Working status | Functional |
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| Other features | |
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| Other citations | Not available |
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